ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zh9B1 - ECOD Domain | ECOD

ECOD/Domains/e3zh9B1

e3zh9B1

UID: 000235967

PDB

Range: B:1-147
PDB: 3ZH9 chain B(all domains)
UniProt: P54459 (all domains)
Gene: holA

Molecule: DELTA

3D Structure

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Related Domains

Browse other domains in DNA_pol3_delta →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDNA_pol3_delta(2004.1.1.138)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06144DNA_pol3_delta

DNA polymerase III, delta subunit

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3ZH9 RCSB PDB: 3ZH9 PDBe: 3ZH9 UniProt: P54459

Downloads

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