ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ze3B3 - ECOD Domain | ECOD

ECOD/Domains/e5ze3B3

e5ze3B3

UID: 002387828

RepresentativePDB

Range: B:547-763
PDB: 5ZE3 chain B(all domains)
UniProt: Q9Y4K0 (all domains)
Gene: LOXL2

Molecule: Lysyl oxidase homolog 2

3D Structure

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Related Domains

Browse other domains in Lysyl_oxidase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyLysyl_oxidase(11.1.1.22)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal
Zinc ion

Pfam Families

PF01186Lysyl_oxidase

Lysyl oxidase

External Links

ECOD PDB View: 5ZE3 RCSB PDB: 5ZE3 PDBe: 5ZE3 UniProt: Q9Y4K0

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.