ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zi9B1 - ECOD Domain | ECOD

ECOD/Domains/e5zi9B1

e5zi9B1

UID: 002387831

RepresentativePDB

Range: B:45-250
PDB: 5ZI9 chain B(all domains)
UniProt: Q9FBL8 (all domains)
Gene: SCO5140

Molecule: Cytokinin riboside 5'-monophosphate phosphoribohydrolase

3D Structure

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Related Domains

Browse other domains in Lysine_decarbox →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMCP/YpsA-related(7563)

HH-groupMCP/YpsA-related(7563.1)

TT-groupMCP/YpsA-related(7563.1.1)

FFamilyLysine_decarbox(7563.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, Citrate anion)

1,2-ETHANEDIOLEDO
Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03641Lysine_decarbox

Possible lysine decarboxylase

ClanCL0349SLOG

External Links

ECOD PDB View: 5ZI9 RCSB PDB: 5ZI9 PDBe: 5ZI9 UniProt: Q9FBL8

Downloads

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