ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fv5B1 - ECOD Domain | ECOD

ECOD/Domains/e6fv5B1

e6fv5B1

UID: 002388347

PDB

Range: B:-1-291,B:327-415
PDB: 6FV5 chain B(all domains)
UniProt: B8ZXI1 (all domains)
Gene: Qtrt2

Molecule: Queuine tRNA-ribosyltransferase accessory subunit 2

3D Structure

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Related Domains

Browse other domains in TGT →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTGT(2002.1.1.73)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Queuine tRNA-ribosyltransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6FV5 RCSB PDB: 6FV5 PDBe: 6FV5 UniProt: B8ZXI1

Downloads

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