ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xm7A4 - ECOD Domain | ECOD

ECOD/Domains/e5xm7A4

e5xm7A4

UID: 002388480

PDB

Range: A:746-1085
PDB: 5XM7 chain A(all domains)
UniProt: O96935 (all domains)
Gene: M1AAP

Molecule: M1 family aminopeptidase

3D Structure

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Related Domains

Browse other domains in DUF3458_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyDUF3458_C(109.4.1.241)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
(2S)-4-methyl-N-[(1R)-2-(oxidanylamino)-2-oxidanylidene-1-phenyl-ethyl]-2-[(phenylmethyl)carbamoylamino]pentanamide89X
within 5 Å only

+ 1 additive (Glycerol)

GlycerolGOL

Pfam Families

PF17432DUF3458_C

Domain of unknown function (DUF3458_C) ARM repeats

ClanCL0020TPR

External Links

ECOD PDB View: 5XM7 RCSB PDB: 5XM7 PDBe: 5XM7 UniProt: O96935

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.