ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zh2A2 - ECOD Domain | ECOD

ECOD/Domains/e5zh2A2

e5zh2A2

UID: 002388859

PDB

Range: A:77-223
PDB: 5ZH2 chain A(all domains)
UniProt: W7JP72 (all domains)
Gene: PFNF54_04763

Molecule: Lysine-tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA_anti-codon →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilytRNA_anti-codon(2.1.1.15)

Ligands

in contact, ≤ 4 Å

3-(N-morpholino)propanesulfonic acidMPO
drugDrugBank DB03434
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01336tRNA_anti-codon

OB-fold nucleic acid binding domain

ClanCL0021OB

External Links

ECOD PDB View: 5ZH2 RCSB PDB: 5ZH2 PDBe: 5ZH2 UniProt: W7JP72

Downloads

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