ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zw3B1 - ECOD Domain | ECOD

ECOD/Domains/e5zw3B1

e5zw3B1

UID: 002389408

PDB

Range: B:3-163,B:190-217
PDB: 5ZW3 chain B(all domains)
UniProt: O32036 (all domains)
Gene: trmR

Molecule: Putative O-methyltransferase YrrM

3D Structure

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Related Domains

Browse other domains in Methyltransf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_3(2003.1.5.14)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01596Methyltransf_3

O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5ZW3 RCSB PDB: 5ZW3 PDBe: 5ZW3 UniProt: O32036

Downloads

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