ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bgaA2 - ECOD Domain | ECOD

ECOD/Domains/e6bgaA2

e6bgaA2

UID: 002389749

PDB

Range: A:1-81
PDB: 6BGA chain A(all domains)
UniProt: P04224 (all domains)

Molecule: H-2 class II histocompatibility antigen, E-K alpha chain

3D Structure

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Related Domains

Browse other domains in MHC_II_alpha →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_II_alpha(233.1.1.3)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

PF00993MHC_II_alpha

Class II histocompatibility antigen, alpha domain

ClanCL0343MHC

External Links

ECOD PDB View: 6BGA RCSB PDB: 6BGA PDBe: 6BGA UniProt: P04224

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.