ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y0zB2 - ECOD Domain | ECOD

ECOD/Domains/e5y0zB2

e5y0zB2

UID: 002389873

PDB

Range: B:55-188,B:233-356
PDB: 5Y0Z chain B(all domains)
UniProt: Q8IXJ6 (all domains)
Gene: SIRT2

Molecule: NAD-dependent protein deacetylase sirtuin-2

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

(1~{R},9~{S})-11-[(2~{R})-3-[2,4-bis(2-methylbutan-2-yl)phenoxy]-2-oxidanyl-propyl]-7,11-diazatricyclo[7.3.1.0^{2,7}]trideca-2,4-dien-6-one8K9

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5Y0Z RCSB PDB: 5Y0Z PDBe: 5Y0Z UniProt: Q8IXJ6

Downloads

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