ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zm0A1 - ECOD Domain | ECOD

ECOD/Domains/e5zm0A1

e5zm0A1

UID: 002389896

PDB

Range: A:3-208
PDB: 5ZM0 chain A(all domains)
UniProt: A8J8W0 (all domains)
Gene: CHLRE_06g278251v5

Molecule: Cryptochrome photoreceptor

3D Structure

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Related Domains

Browse other domains in DNA_photolyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyDNA_photolyase(2005.1.1.9)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

GlycerinGOL
DrugBank DB09462
2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer.

Pfam Families

PF00875DNA_photolyase

DNA photolyase

ClanCL0039HUP

External Links

ECOD PDB View: 5ZM0 RCSB PDB: 5ZM0 PDBe: 5ZM0 UniProt: A8J8W0

Downloads

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Drug annotations from DrugDomain.