ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6gneB1 - ECOD Domain | ECOD

ECOD/Domains/e6gneB1

e6gneB1

UID: 002390084

PDB

Range: B:278-516
PDB: 6GNE chain B(all domains)
UniProt: Q0WVX5 (all domains)
Gene: SS4

Molecule: Probable starch synthase 4, chloroplastic/amyloplastic

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_trans_1_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_trans_1_4(7512.1.1.32)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13692Glyco_trans_1_4

Glycosyl transferases group 1

ClanCL0113GT-B

External Links

ECOD PDB View: 6GNE RCSB PDB: 6GNE PDBe: 6GNE UniProt: Q0WVX5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure