ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zznU1 - ECOD Domain | ECOD

ECOD/Domains/e5zznU1

e5zznU1

UID: 002390249

PDB

Range: U:8-104
PDB: 5ZZN chain U(all domains)
UniProt: Q9F1L5 (all domains)
Gene: psbU

Molecule: Photosystem II 12 kDa extrinsic protein

3D Structure

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Related Domains

Browse other domains in PsbU →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyPsbU(102.1.1.15)

Ligands

in contact, ≤ 4 Å

Heptyl 1-ThiohexopyranosideHTG
drugDrugBank DB04450
Unknown ligandUNL

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxide

Pfam Families

Photosystem II 12 kDa extrinsic protein (PsbU)

ClanCL0198HHH

External Links

ECOD PDB View: 5ZZN RCSB PDB: 5ZZN PDBe: 5ZZN UniProt: Q9F1L5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.