ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bh8A1 - ECOD Domain | ECOD

ECOD/Domains/e6bh8A1

e6bh8A1

UID: 002390832

PDB

Range: A:16-60,A:100-283,A:323-470
PDB: 6BH8 chain A(all domains)
UniProt: O75844 (all domains)
Gene: ZMPSTE24

Molecule: CAAX prenyl protease 1 homolog

3D Structure

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Related Domains

Browse other domains in Peptidase_M48,Peptidase_M48_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M48,Peptidase_M48_N(2498.1.1.11)

Ligands

in contact, ≤ 4 Å

PhosphoramidonRDF
drugDrugBank DB02557
Zinc ionZN
metal

+ 1 additive ((Hydroxyethyloxy)Tri(Ethyloxy)Octane)

Pfam Families

PF01435Peptidase_M48

Peptidase family M48

ClanCL0126Peptidase_MA

PF16491Peptidase_M48_N

CAAX prenyl protease N-terminal, five membrane helices

External Links

ECOD PDB View: 6BH8 RCSB PDB: 6BH8 PDBe: 6BH8 UniProt: O75844

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E

DrugBank DB04233

Shown in the structure viewer. Drug annotations from DrugDomain.