ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5zcwA1 - ECOD Domain | ECOD

ECOD/Domains/e5zcwA1

e5zcwA1

UID: 002391045

PDB

Range: A:-2-228
PDB: 5ZCW chain A(all domains)
UniProt: Q8PYK9 (all domains)
Gene: MM_0852

Molecule: Deoxyribodipyrimidine photolyase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_photolyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyDNA_photolyase(2005.1.1.9)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00875DNA_photolyase

DNA photolyase

ClanCL0039HUP

External Links

ECOD PDB View: 5ZCW RCSB PDB: 5ZCW PDBe: 5ZCW UniProt: Q8PYK9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure