ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h2pB1 - ECOD Domain | ECOD

ECOD/Domains/e6h2pB1

e6h2pB1

UID: 002391825

PDB

Range: B:188-489
PDB: 6H2P chain B(all domains)
UniProt: P12955 (all domains)
Gene: PEPD

Molecule: Xaa-Pro dipeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M24 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupCreatinase/aminopeptidase-like(283)

HH-groupCreatinase/aminopeptidase(283.1)

TT-groupCreatinase/aminopeptidase(283.1.1)

FFamilyPeptidase_M24(283.1.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 2 additives (Glycerin, Cacodylate ion)

GlycerinGOL
DrugBank DB09462
Cacodylate ion

Pfam Families

PF00557Peptidase_M24

Metallopeptidase family M24

External Links

ECOD PDB View: 6H2P RCSB PDB: 6H2P PDBe: 6H2P UniProt: P12955

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.