ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ywxA1 - ECOD Domain | ECOD

ECOD/Domains/e5ywxA1

e5ywxA1

UID: 002391958

PDB

Range: A:2-73
PDB: 5YWX chain A(all domains)
UniProt: O60760 (all domains)
Gene: HPGDS

Molecule: Hematopoietic prostaglandin D synthase

3D Structure

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Related Domains

Browse other domains in GST_N →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyGST_N(2485.1.1.13)

Ligands

in contact, ≤ 4 Å

GlutathioneGSH
drugDrugBank DB00143
N-[4-(2-oxopyrrolidin-1-yl)phenyl]-2-(pyridin-2-yl)pyrimidine-5-carboxamide93C

+ 1 additive (Glycerin)

Glycerin

Pfam Families

Glutathione S-transferase, N-terminal domain

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 5YWX RCSB PDB: 5YWX PDBe: 5YWX UniProt: O60760

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.