ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6aggZ1 - ECOD Domain | ECOD

ECOD/Domains/e6aggZ1

e6aggZ1

UID: 002391978

PDB

Range: Z:250-420
PDB: 6AGG chain Z(all domains)
UniProt: O28025 (all domains)
Gene: tiaS

Molecule: tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

AgmatineAG2
drugDrugBank DB08838
Zinc ionZN
metal

+ 1 additive (Acetate ion)

External Links

ECOD PDB View: 6AGG RCSB PDB: 6AGG PDBe: 6AGG UniProt: O28025

Downloads

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Acetate ion

Shown in the structure viewer. Drug annotations from DrugDomain.