ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6aggZ2 - ECOD Domain | ECOD

ECOD/Domains/e6aggZ2

e6aggZ2

UID: 002391979

PDB

Range: Z:155-249
PDB: 6AGG chain Z(all domains)
UniProt: O28025 (all domains)
Gene: tiaS

Molecule: tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS

3D Structure

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Related Domains

Browse other domains in DUF1743 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyDUF1743(304.9.1.14)

Ligands

in contact, ≤ 4 Å

AgmatineAG2
drugDrugBank DB08838

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08489TiaS_FLD

TiaS FLD domain

ClanCL0221RRM

External Links

ECOD PDB View: 6AGG RCSB PDB: 6AGG PDBe: 6AGG UniProt: O28025

Downloads

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