ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6aggZ3 - ECOD Domain | ECOD

ECOD/Domains/e6aggZ3

e6aggZ3

UID: 002391980

PDB

Range: Z:1-154
PDB: 6AGG chain Z(all domains)
UniProt: O28025 (all domains)
Gene: tiaS

Molecule: tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS

3D Structure

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Related Domains

Browse other domains in TiaS-FLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyTiaS-FLD(304.48.1.32)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
Magnesium ionMG
metal

+ 2 additives (Acetate, Ammonium ion)

Pfam Families

PF22641TiaS_TCKD

TiaS TCKD domain

ClanCL0221RRM

External Links

ECOD PDB View: 6AGG RCSB PDB: 6AGG PDBe: 6AGG UniProt: O28025

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT
DrugBank DB14511
Ammonium ionNH4

Shown in the structure viewer. Drug annotations from DrugDomain.