ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6cc9A1 - ECOD Domain | ECOD

ECOD/Domains/e6cc9A1

e6cc9A1

UID: 002392007

PDB

Range: A:201-398
PDB: 6CC9 chain A(all domains)
UniProt: P02647 (all domains)
Gene: APOA1

Molecule: Apolipoprotein A-I

3D Structure

Loading viewer...

Related Domains

Browse other domains in Apolipoprotein →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupApolipoprotein(601.19)

TT-groupApolipoprotein(601.19.1)

FFamilyApolipoprotein(601.19.1.1)

Ligands

in contact, ≤ 4 Å

(Z,Z)-4-Hydroxy-N,N,N-Trimethyl-10-Oxo-7-[(1-Oxo-9-Octadecenyl)Oxy]-3,5,9-Trioxa-4-Phosphaheptacos-18-En-1-Aminium-4-OxidePCW
drugDrugBank DB03690
1,2-Dioleoyl-sn-glycero-3-phospho-L-serine17F

Pfam Families

PF01442Apolipoprotein

Apolipoprotein A1/A4/E domain

ClanCL0725Apolipoprotein

External Links

ECOD PDB View: 6CC9 RCSB PDB: 6CC9 PDBe: 6CC9 UniProt: P02647

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drug

DrugBank DB18573

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.