ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fmyA2 - ECOD Domain | ECOD

ECOD/Domains/e6fmyA2

e6fmyA2

UID: 002392085

PDB

Range: A:5-218
PDB: 6FMY chain A(all domains)
UniProt: Q5M4H8 (all domains)
Gene: dtpT

Molecule: Di-or tripeptide:H+ symporter

3D Structure

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Related Domains

Browse other domains in PTR2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupMajor facilitator superfamily (MFS) general substrate transporter(5050)

HH-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1)

TT-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1.1)

FFamilyPTR2(5050.1.1.2)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400PE5
drugDrugBank DB03556
(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE78M

+ 1 additive (Phosphate ion)

Pfam Families

POT family

ClanCL0015MFS

External Links

ECOD PDB View: 6FMY RCSB PDB: 6FMY PDBe: 6FMY UniProt: Q5M4H8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.