ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6evmA1 - ECOD Domain | ECOD

ECOD/Domains/e6evmA1

e6evmA1

UID: 002392354

PDB

Range: A:144-238
PDB: 6EVM chain A(all domains)
UniProt: O15460 (all domains)
Gene: P4HA2

Molecule: Prolyl 4-hydroxylase subunit alpha-2

3D Structure

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Related Domains

Browse other domains in TPR_P4H →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_P4H(109.4.1.952)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23558TPR_P4H

Prolyl 4-hydroxylase peptide-substrate-binding domain

ClanCL0020TPR

External Links

ECOD PDB View: 6EVM RCSB PDB: 6EVM PDBe: 6EVM UniProt: O15460

Downloads

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