ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5nfmA1 - ECOD Domain | ECOD

ECOD/Domains/e5nfmA1

e5nfmA1

UID: 002393305

PDB

Range: A:3-77
PDB: 5NFM chain A(all domains)
UniProt: A0A452CS62 (all domains)
Gene: SM2011_c00487

Molecule: YrbA

3D Structure

Loading viewer...

Related Domains

Browse other domains in BolA →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupBolA-like(327.2)

TT-groupBolA-like(327.2.1)

FFamilyBolA(327.2.1.1)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal
Lithium ionLI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

BolA-like protein

External Links

ECOD PDB View: 5NFM RCSB PDB: 5NFM PDBe: 5NFM UniProt: A0A452CS62

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure