ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zo8A1 - ECOD Domain | ECOD

ECOD/Domains/e5zo8A1

e5zo8A1

UID: 002393355

PDB

Range: A:16-367
PDB: 5ZO8 chain A(all domains)
UniProt: P52732 (all domains)
Gene: KIF11

Molecule: Kinesin-like protein KIF11

3D Structure

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Related Domains

Browse other domains in Kinesin,Microtub_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyKinesin,Microtub_bd(2004.1.1.250)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
(2R)-2-azanyl-3-[(4-methoxyphenyl)-diphenyl-methyl]sulfanyl-propanoic acid4C5
Magnesium ionMG

Pfam Families

PF00225Kinesin

Kinesin motor domain

ClanCL0023P-loop_NTPase

PF16796Microtub_bd

Microtubule binding

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5ZO8 RCSB PDB: 5ZO8 PDBe: 5ZO8 UniProt: P52732

Downloads

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metal

Sodium ionNA

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.