ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6a7vC1 - ECOD Domain | ECOD

ECOD/Domains/e6a7vC1

e6a7vC1

UID: 002393373

PDB

Range: C:-4-134
PDB: 6A7V chain C(all domains)
UniProt: P9WFA5 (all domains)
Gene: vapC11

Molecule: Ribonuclease VapC11

3D Structure

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Related Domains

Browse other domains in PIN →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN(2006.1.4.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Pentaethylene glycol)

Sulfate ionSO4
DrugBank DB14546
Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PIN domain

ClanCL0280PIN

External Links

ECOD PDB View: 6A7V RCSB PDB: 6A7V PDBe: 6A7V UniProt: P9WFA5

Downloads

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