ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gnvA1 - ECOD Domain | ECOD

ECOD/Domains/e6gnvA1

e6gnvA1

UID: 002393515

PDB

Range: A:217-421
PDB: 6GNV chain A(all domains)
UniProt: Q4Q5S8 (all domains)
Gene: NMT

Molecule: Glycylpeptide N-tetradecanoyltransferase

3D Structure

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Related Domains

Browse other domains in NMT_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyNMT_C(213.1.1.9)

Ligands

in contact, ≤ 4 Å

Myristoyl-CoaMYA
drugDrugBank DB02180
~{N}-[2-methyl-5-(2-methylpropyl)indazol-4-yl]-4-[4-(1-methylpiperidin-4-yl)butyl]benzenesulfonamideF5E

+ 1 additive (Glycerin)

Pfam Families

Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 6GNV RCSB PDB: 6GNV PDBe: 6GNV UniProt: Q4Q5S8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.