ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ogkC1 - ECOD Domain | ECOD

ECOD/Domains/e5ogkC1

e5ogkC1

UID: 002394313

PDB

Range: C:18-161,C:181-333
PDB: 5OGK chain C(all domains)
UniProt: P40107 (all domains)
Gene: VRG4

Molecule: GDP-mannose transporter 1

3D Structure

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Related Domains

Browse other domains in UAA →

Classification

AArchitecturealpha bundles(a.7)

XX-groupDrug/Metabolite transporter(5059)

HH-groupDrug/Metabolite transporter(5059.1)

TT-groupDrug/Metabolite transporter(5059.1.1)

FFamilyUAA(5059.1.1.5)

Ligands

in contact, ≤ 4 Å

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

UAA transporter family

ClanCL0184DMT

External Links

ECOD PDB View: 5OGK RCSB PDB: 5OGK PDBe: 5OGK UniProt: P40107

Downloads

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