ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6emgA1 - ECOD Domain | ECOD

ECOD/Domains/e6emgA1

e6emgA1

UID: 002394367

PDB

Range: A:5-258
PDB: 6EMG chain A(all domains)
UniProt: G0S4M2 (all domains)
Gene: CTHT_0031510

Molecule: G0S4M2

3D Structure

Loading viewer...

Related Domains

Browse other domains in Nop52 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNop52(109.4.1.85)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (HEPES, Phosphate ion, 1,2-ETHANEDIOL)

HEPESEPE
DrugBank DB16872
Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

Nucleolar protein,Nop52

External Links

ECOD PDB View: 6EMG RCSB PDB: 6EMG PDBe: 6EMG UniProt: G0S4M2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.