ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6emgB1 - ECOD Domain | ECOD

ECOD/Domains/e6emgB1

e6emgB1

UID: 002394368

PDB

Range: B:7-259
PDB: 6EMG chain B(all domains)
UniProt: G0S4M2 (all domains)
Gene: CTHT_0031510

Molecule: G0S4M2

3D Structure

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Related Domains

Browse other domains in Nop52 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNop52(109.4.1.85)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nucleolar protein,Nop52

External Links

ECOD PDB View: 6EMG RCSB PDB: 6EMG PDBe: 6EMG UniProt: G0S4M2

Downloads

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