ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cfcA2 - ECOD Domain | ECOD

ECOD/Domains/e6cfcA2

e6cfcA2

UID: 002394590

PDB

Range: A:366-532
PDB: 6CFC chain A(all domains)

Molecule: Lytic transglycosylase

3D Structure

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Related Domains

Browse other domains in SLT →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilySLT(235.1.1.9)

Ligands

in contact, ≤ 4 Å

(2R,3S,5S)-2-(Hydroxymethyl)-5-[(2-sulfoethyl)carbamoyl]-3-pyrrolidiniumyl 2-acetamido-2-deoxy-4-O-sulfo-beta-D-glucopyranosideBLG
drugDrugBank DB02595

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

Transglycosylase SLT domain

ClanCL0037Lysozyme

External Links

ECOD PDB View: 6CFC RCSB PDB: 6CFC PDBe: 6CFC

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.