ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6a7vU1 - ECOD Domain | ECOD

ECOD/Domains/e6a7vU1

e6a7vU1

UID: 002395056

PDB

Range: U:2-63
PDB: 6A7V chain U(all domains)
UniProt: P9WLU3 (all domains)
Gene: vapB11

Molecule: Antitoxin VapB11

3D Structure

Loading viewer...

Related Domains

Browse other domains in VapB_antitoxin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupRibbon-helix-helix(101.1.11)

FFamilyVapB_antitoxin(101.1.11.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09957VapB_antitoxin

Bacterial antitoxin of type II TA system, VapB

ClanCL0057Met_repress

External Links

ECOD PDB View: 6A7V RCSB PDB: 6A7V PDBe: 6A7V UniProt: P9WLU3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure