ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6b4cL1 - ECOD Domain | ECOD

ECOD/Domains/e6b4cL1

e6b4cL1

UID: 002395756

PDB

Range: L:18-294
PDB: 6B4C chain L(all domains)
UniProt: G9MQB8 (all domains)
Gene: TRIVIDRAFT_58105

Molecule: Viperin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Citrate anion)

Sulfate ionSO4
DrugBank DB14546
Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6B4C RCSB PDB: 6B4C PDBe: 6B4C UniProt: G9MQB8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure