ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6behC3 - ECOD Domain | ECOD

ECOD/Domains/e6behC3

e6behC3

UID: 002396182

PDB

Range: C:225-270,C:421-547
PDB: 6BEH chain C(all domains)
UniProt: P68440 (all domains)
Gene: OPG125

Molecule: Scaffold protein D13

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pox_Rif →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPox_Rif(10.2.1.33)

Ligands

in contact, ≤ 4 Å

RifapentineRPT
drugDrugBank DB01201

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT
DrugBank DB01942

Pfam Families

PF03340Pox_Rif

Poxvirus rifampicin resistance protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6BEH RCSB PDB: 6BEH PDBe: 6BEH UniProt: P68440

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.