ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6cvsB1 - ECOD Domain | ECOD

ECOD/Domains/e6cvsB1

e6cvsB1

UID: 002397448

PDB

Range: B:163-315
PDB: 6CVS chain B(all domains)
UniProt: Q7Z2E3 (all domains)
Gene: APTX

Molecule: Aprataxin

3D Structure

Loading viewer...

Related Domains

Browse other domains in DcpS_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupHIT-like(312)

HH-groupHIT-related(312.1)

TT-groupHIT-related(312.1.1)

FFamilyDcpS_C(312.1.1.8)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
MercaptoethanolBME
drugDrugBank DB03345

Shown in the structure viewer.

Pfam Families

Scavenger mRNA decapping enzyme C-term binding

ClanCL0265HIT

External Links

ECOD PDB View: 6CVS RCSB PDB: 6CVS PDBe: 6CVS UniProt: Q7Z2E3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.