ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6d05D1 - ECOD Domain | ECOD

ECOD/Domains/e6d05D1

e6d05D1

UID: 002397729

PDB

Range: D:1-99,D:590-679
PDB: 6D05 chain D(all domains)
UniProt: P02787 (all domains)
Gene: TF

Molecule: Serotransferrin

3D Structure

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Related Domains

Browse other domains in Transferrin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTransferrin(7523.1.1.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
FE (III) IONFE
metal

+ 1 additive (Carbonate ion)

Pfam Families

PF00405Transferrin

Transferrin

ClanCL0177PBP

External Links

ECOD PDB View: 6D05 RCSB PDB: 6D05 PDBe: 6D05 UniProt: P02787

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Carbonate ionCO3

DrugBank DB14531

Shown in the structure viewer. Drug annotations from DrugDomain.