ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6d27A2 - ECOD Domain | ECOD

ECOD/Domains/e6d27A2

e6d27A2

UID: 002397797

PDB

Range: A:232-1355
PDB: 6D27 chain A(all domains)
UniProt: Q9Y5Y4 (all domains)
Gene: PTGDR2

Molecule: Prostaglandin D2 receptor 2, Endolysin chimera

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (2-(N-morpholino)ethanesulfonic acid, Triethylene glycol, Sulfate ion)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814
Triethylene glycolPGE
DrugBank DB02327

External Links

ECOD PDB View: 6D27 RCSB PDB: 6D27 PDBe: 6D27 UniProt: Q9Y5Y4

Downloads

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Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.