ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6d4oA2 - ECOD Domain | ECOD

ECOD/Domains/e6d4oA2

e6d4oA2

UID: 002397837

PDB

Range: A:281-610
PDB: 6D4O chain A(all domains)
UniProt: A0A174ZZA3 (all domains)
Gene: uidA

Molecule: Beta-glucuronidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(5aR,9aR)-2-chloro-11-(4-beta-D-glucopyranuronosylpiperazin-1-yl)-5a,6,9,9a-tetrahydrodibenzo[b,f][1,4]oxazepineFUV
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6D4O RCSB PDB: 6D4O PDBe: 6D4O UniProt: A0A174ZZA3

Downloads

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Drug annotations from DrugDomain.