ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ddyA2 - ECOD Domain | ECOD

ECOD/Domains/e6ddyA2

e6ddyA2

UID: 002398359

PDB

Range: A:26-60,A:226-398,A:420-488
PDB: 6DDY chain A(all domains)
UniProt: P49902 (all domains)
Gene: NT5C2

Molecule: Cytosolic purine 5'-nucleotidase

3D Structure

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Related Domains

Browse other domains in 5_nucleotid →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamily5_nucleotid(2006.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF057615_nucleotid

5' nucleotidase family

ClanCL0137HAD

External Links

ECOD PDB View: 6DDY RCSB PDB: 6DDY PDBe: 6DDY UniProt: P49902

Downloads

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