ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6dgdB5 - ECOD Domain | ECOD

ECOD/Domains/e6dgdB5

e6dgdB5

UID: 002398445

PDB

Range: B:385-428,B:489-509,B:529-630
PDB: 6DGD chain B(all domains)
UniProt: A0A1W2ITH4 (all domains)
Gene: priA

Molecule: Primosomal protein N'

3D Structure

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Related Domains

Browse other domains in Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C(2004.1.1.30)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6DGD RCSB PDB: 6DGD PDBe: 6DGD UniProt: A0A1W2ITH4

Downloads

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