ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6du2B1 - ECOD Domain | ECOD

ECOD/Domains/e6du2B1

e6du2B1

UID: 002399169

PDB

Range: B:77-256
PDB: 6DU2 chain B(all domains)
UniProt: A0A1S2ZIM2 (all domains)
Gene: CTDSP1

Molecule: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2

3D Structure

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Related Domains

Browse other domains in NIF →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamilyNIF(2006.1.1.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NLI interacting factor-like phosphatase

ClanCL0137HAD

External Links

ECOD PDB View: 6DU2 RCSB PDB: 6DU2 PDBe: 6DU2 UniProt: A0A1S2ZIM2

Downloads

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