ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6dwyA1 - ECOD Domain | ECOD

ECOD/Domains/e6dwyA1

e6dwyA1

UID: 002399642

PDB

Range: A:163-470,A:517-609
PDB: 6DWY chain A(all domains)
UniProt: Q25438 (all domains)

Molecule: Hermes transposase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Dimer_Tnp_hAT →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDimer_Tnp_hAT(2484.1.1.50)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05699Dimer_Tnp_hAT

hAT family C-terminal dimerisation region

External Links

ECOD PDB View: 6DWY RCSB PDB: 6DWY PDBe: 6DWY UniProt: Q25438

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure