ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6e4qD1 - ECOD Domain | ECOD

ECOD/Domains/e6e4qD1

e6e4qD1

UID: 002399909

PDB

Range: D:514-650
PDB: 6E4Q chain D(all domains)
UniProt: Q8MRC9 (all domains)
Gene: Pgant9

Molecule: polypeptide N-acetylgalactosaminyltransferase 9

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 6E4Q RCSB PDB: 6E4Q PDBe: 6E4Q UniProt: Q8MRC9

Downloads

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