ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fd5A1 - ECOD Domain | ECOD

ECOD/Domains/e6fd5A1

e6fd5A1

UID: 002401002

PDB

Range: A:3-180
PDB: 6FD5 chain A(all domains)
UniProt: P07741 (all domains)
Gene: APRT

Molecule: Adenine phosphoribosyltransferase

3D Structure

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Related Domains

Browse other domains in Pribosyltran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPRTase-like(7573)

HH-groupPRTase-like(7573.1)

TT-groupPRTase-like(7573.1.1)

FFamilyPribosyltran(7573.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
Pyrophosphoric acidPPV
drugDrugBank DB04160

Pfam Families

PF00156Pribosyltran

Phosphoribosyl transferase domain

ClanCL0533PRTase-like

External Links

ECOD PDB View: 6FD5 RCSB PDB: 6FD5 PDBe: 6FD5 UniProt: P07741

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

5-O-phosphono-alpha-D-ribofuranosyl diphosphate

drugDrugBank DB01632

Magnesium ionMG

metalwithin 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.