ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fvvI2 - ECOD Domain | ECOD

ECOD/Domains/e6fvvI2

e6fvvI2

UID: 002401485

PDB

Range: I:164-351
PDB: 6FVV chain I(all domains)
UniProt: P40327 (all domains)
Gene: RPT2

Molecule: 26S proteasome regulatory subunit 4 homolog

3D Structure

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Related Domains

Browse other domains in AAA, DUF815 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA, DUF815(2004.1.1.425)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
ATPATP
drugDrugBank DB00171
Magnesium ion

Pfam Families

ATPase family associated with various cellular activities (AAA)

ClanCL0023P-loop_NTPase

Protein of unknown function (DUF815)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6FVV RCSB PDB: 6FVV PDBe: 6FVV UniProt: P40327

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.