ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gqfB1 - ECOD Domain | ECOD

ECOD/Domains/e6gqfB1

e6gqfB1

UID: 002402842

PDB

Range: B:365-533
PDB: 6GQF chain B(all domains)
UniProt: Q8VEF1 (all domains)
Gene: Gramd1a

Molecule: GRAM domain-containing protein 1A

3D Structure

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Related Domains

Browse other domains in VASt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyVASt(331.3.1.17)

Ligands

in contact, ≤ 4 Å

25-HydroxycholesterolHC3
drugDrugBank DB04705

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

VAD1 Analog of StAR-related lipid transfer domain

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 6GQF RCSB PDB: 6GQF PDBe: 6GQF UniProt: Q8VEF1

Downloads

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Drug annotations from DrugDomain.