ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h42B1 - ECOD Domain | ECOD

ECOD/Domains/e6h42B1

e6h42B1

UID: 002403706

PDB

Range: B:13-403
PDB: 6H42 chain B(all domains)
UniProt: Q9BXR0 (all domains)
Gene: QTRT1

Molecule: Queuine tRNA-ribosyltransferase catalytic subunit 1

3D Structure

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Related Domains

Browse other domains in TGT →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTGT(2002.1.1.73)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142within 5 Å only
Bromide ionBR
Chloride ionCL

Pfam Families

Queuine tRNA-ribosyltransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6H42 RCSB PDB: 6H42 PDBe: 6H42 UniProt: Q9BXR0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Potassium ionK

metal

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.