ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ohsD1 - ECOD Domain | ECOD

ECOD/Domains/e5ohsD1

e5ohsD1

UID: 002404949

PDB

Range: D:568-638
PDB: 5OHS chain D(all domains)
UniProt: A0A083ZKV2 (all domains)

Molecule: Alpha-glucosidase yihQ

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_31_3rd →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyGlyco_hydro_31_3rd(12.1.1.50)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21365Glyco_hydro_31_3rd

Glycosyl hydrolase family 31 C-terminal domain

ClanCL0369GHD

External Links

ECOD PDB View: 5OHS RCSB PDB: 5OHS PDBe: 5OHS UniProt: A0A083ZKV2

Downloads

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