ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ty7A1 - ECOD Domain | ECOD

ECOD/Domains/e5ty7A1

e5ty7A1

UID: 002405653

PDB

Range: A:25-70,A:202-314
PDB: 5TY7 chain A(all domains)
UniProt: A0A0H2WY27 (all domains)
Gene: pbp4

Molecule: Penicillin-binding protein 4

3D Structure

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Related Domains

Browse other domains in Peptidase_S11 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyPeptidase_S11(223.3.1.2)

Ligands

in contact, ≤ 4 Å

(2R,4S)-2-[(1R)-1-{[(2-ethoxynaphthalen-1-yl)carbonyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylicacidNFF

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00768Peptidase_S11

D-alanyl-D-alanine carboxypeptidase

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5TY7 RCSB PDB: 5TY7 PDBe: 5TY7 UniProt: A0A0H2WY27

Downloads

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