ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vbiB2 - ECOD Domain | ECOD

ECOD/Domains/e5vbiB2

e5vbiB2

UID: 002405741

PDB

Range: B:1-191
PDB: 5VBI chain B(all domains)
UniProt: P36871 (all domains)
Gene: PGM1

Molecule: Phosphoglucomutase-1

3D Structure

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Related Domains

Browse other domains in PGM_PMM_I →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphoglucomutase, first 3 domains(7528)

HH-groupPhosphoglucomutase, first 3 domains(7528.1)

TT-groupPhosphoglucomutase, first 3 domains(7528.1.1)

FFamilyPGM_PMM_I(7528.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02878PGM_PMM_I

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I

ClanCL0754PGM_I-III

External Links

ECOD PDB View: 5VBI RCSB PDB: 5VBI PDBe: 5VBI UniProt: P36871

Downloads

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