ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w4cB1 - ECOD Domain | ECOD

ECOD/Domains/e5w4cB1

e5w4cB1

UID: 002406411

PDB

Range: B:14-153,B:278-351
PDB: 5W4C chain B(all domains)
UniProt: J9VRX9 (all domains)
Gene: CNAG_05847

Molecule: Thioredoxin reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Calcium ionCA
metal

+ 1 additive (Glycerin)

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5W4C RCSB PDB: 5W4C PDBe: 5W4C UniProt: J9VRX9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.